April 9st, 2019
Resolution Liquid Biopsy Assay Demonstrates Fewer False Positives and Higher Positive Predictive Value Than Three Known Commercial ctDNA NGS Tests
AstraZeneca scientists publish results of first blinded study to use replicate tumor-matched plasmas and multiple orthogonal assays to examine factors affecting tumor-plasma concordance
KIRKLAND, WA — April 9, 2019 — Resolution Bioscience, Inc., today announced that a team of AstraZeneca scientists recently published results of a study looking at assay discordance and technical variations between four leading commercial next-generation sequencing (NGS) gene panels. The Resolution ctDx Liquid Biopsy Assay (Vendor B) had the highest positive predictive value (80%) and the lowest number of false positives in the study. The manuscript, “Orthogonal Comparison of Four Plasma NGS Tests with Tumor Suggests Technical Factors are a Major Source of Assay Discordance,” was released online ahead of publication in JCO Precision Oncology.
Numerous comparative studies have proven that discordance between plasma and tumor variant calls can be attributed primarily to tumor heterogeneity and temporal differences between the collection of tissue and plasma. However, these studies did not examine the technical variables of different assays. The team at AstraZeneca tested four NGS assays for mutations in circulating tumor DNA (ctDNA) using replicate sets of 24 plasma samples and compared the results with matched tissue pair results from two NGS vendors. The four vendor names were blinded in the study so that the scientists could focus on factors affecting discordance. Critically, all variants called by other vendors below 0.2% allele frequencies were false positives.
According to the AstraZeneca team, the study findings suggest that most NGS assay discordance is a result of technical variations and, to a lesser extent, biological factors. Resolution supports further comparative studies to highlight the differences between assays and technologies for detecting all four major types of mutations. This AstraZeneca study looked at the easier-to-detect single nucleotide variants and indels. In another recent study presented at the American Association of Cancer Research Annual Meeting last week, researchers at the Dana-Farber Cancer Institute used Resolution’s ctDx technology to detect more gene fusion mutations with higher allele frequencies than the Guardant360 test.
While analytical studies of tissue to plasma concordance are important, Resolution remains focused on demonstrating clinical utility and validation. The company recently published clinical response data with Memorial Sloan Kettering Cancer Center, which showed 97% of Non-Small Cell Lung Cancer patients responded to plasma-directed therapy selection. The tissue is being analyzed by the FDA-approved MSK-IMPACT NGS test, providing consistent, well-validated concordance data. The ongoing study, which now includes more than 800 enrolled patients with stage II, III, or IV cancers, aims to demonstrate clinical response and outcomes based upon plasma-directed therapy selection.
To read the full manuscript of the AstraZeneca study, please visit https://ascopubs.org/doi/pdf/10.1200/PO.18.00191.
The funding for the study was provided by the Expect Miracles Foundation, the Robert and Renee Belfer Foundation, the Damon Runyon Cancer Research Foundation, and the Harold and Gail Kirstein Lung Cancer Research Fund.About Resolution ctDx-Lung™ Liquid Biopsy Assay
The Resolution ctDx Liquid Biopsy Assay is built on Resolution’s patented cell-free DNA NGS analysis platform. The assay captures and analyzes circulating tumor DNA (ctDNA) for driver mutations in 20 genes associated with NSCLC using Resolution’s proprietary targeted capture NGS chemistry and cloud-based bioinformatics.
About Resolution Bioscience
Resolution Bioscience is a privately held company dedicated to developing a highly sensitive, non-invasive liquid biopsy platform that improves cancer diagnostics and monitoring for patients around the world. The company has developed and patented core technology for circulating cell-free DNA NGS analysis and was the first to demonstrate identification of all four major types of mutations in a blinded, clinical study. The company is based in Kirkland, WA. For more information, visit www.resolutionbio.com
Resolution Bioscience, the Resolution Bioscience logo, and ctDx-Lung are trademarks of Resolution Bioscience, Inc. All other brands may be trademarks of their respective holders.